Insertion junction: CLIP2.013358_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013358
Chromosome:contig 35
Location:23085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre35.g802212 (1 of 2) PTHR18945:SF559 - PROTEIN LGC-12 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGGTGAATTTTTTTCAGCGCGCTCTGGGCCCACACGGGTATGACGCC
Internal bar code:GTTTAGTCCCGCCAGTTGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2233
LEAP-Seq percent confirming:1.51515
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTGACCGCGACATCACT
Suggested primer 2:CAGCCCGATCTAGACTGCTG