Insertion junction: CLIP2.013378_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013378
Chromosome:chromosome 6
Location:6492437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294050 (1 of 2) PTHR22640:SF2 - STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATATACTCCACCACTATGTGCGGCATTGCCTCACCGCCTGGCAGCTCC
Internal bar code:TAGCACACGCGACTTCCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3131
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCATGAAATCGCGTCAC
Suggested primer 2:CAAGAGCACGAATGATGGCG