Insertion junction: CLIP2.013387_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013387
Chromosome:chromosome 17
Location:449252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698903 (1 of 1) IPR000014//IPR002395 - PAS domain // HMW kininogen CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCTGCTGGACCCGAGAATGACCGTGGTGCCGCCCATGCAGCTGCCC
Internal bar code:GTGAAAGGTCCGTAAAAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1214
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATTACCTCGGAGCTGGC
Suggested primer 2:CGTGATCCTGTCTCTCGCTC