Insertion junction: CLIP2.013393_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013393
Chromosome:chromosome 10
Location:1945831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431900 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATCTCGTGGATGACGGAAGTTGGCCACATGCGCCTGCCGTTGTCCTA
Internal bar code:GATGTTGCTGCATTCGTATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2380
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCGACCCTCGACTTATG
Suggested primer 2:GTTGGGTTAGGTGCACGGTA