Insertion junction: CLIP2.013395_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013395
Chromosome:chromosome 2
Location:6121610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119651 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGATTGGAGTCAACCACCCCCAGCCCCATTCGGCCCTTACCCCTGC
Internal bar code:TTTAATTGGGACCTTGACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1298
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTTAAACCTCACCACCT
Suggested primer 2:TTCTGCTGGTACCAGTGCTG