Insertion junction: CLIP2.013397_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013397
Chromosome:chromosome 5
Location:151813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00048232

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGTGGTCAACACCACCGTTTGCGGCCTCGAGGAAGCCACCGGAAGC
Internal bar code:TTTGGTGTTTATGTCGGGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3662
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCCCATCATCGTCACA
Suggested primer 2:GATCCACGGGCGAACAAATG