Insertion junction: CLIP2.013401_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013401
Chromosome:chromosome 13
Location:1734249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574400 CYG55 (1 of 11) 4.6.1.1//4.6.1.2 - Adenylate cyclase / ATP pyrophosphate-lyase // Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAGCGGGGGCCTGGCATGCACCGTGAGCAAGCACATGTGCTTGCGCCG
Internal bar code:CCTGTGAGGTTTTATTTCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCCTCAAGGTCAAGCA
Suggested primer 2:TACTGCTGAGCTTTCTGGCC