Insertion junction: CLIP2.013410_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013410
Chromosome:chromosome 16
Location:5703997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680900 RPB1 (1 of 1) K03006 - DNA-directed RNA polymerase II subunit RPB1 (RPB1, POLR2A); DNA-directed RNA polymerase II, largest subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAGGCTGCCCGATGTGGATGTATGGCAGCTAAATGGGGACCCCAGTG
Internal bar code:TGCTCATATTGTCATCAGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:4307
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCATGCATCCATTCGACC
Suggested primer 2:GCGAGACCTATGAGAAGGGC