Insertion junction: CLIP2.013414_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013414
Chromosome:chromosome 3
Location:4801350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCCTTGGAGCGACTGGAGGCCGCCCTGGGTGGGCTGGGCGGACTGAC
Internal bar code:GGTAATGCAAGTGGTGCGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2731
LEAP-Seq percent confirming:62.069
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAATTGGCTATGCACGG
Suggested primer 2:CCCGAGGTTGTGGCAAAAAG