Insertion junction: CLIP2.013421_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013421
Chromosome:chromosome 16
Location:1828963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655400 (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCTCACCTGCATCCGCCATGTCAACGCTGCGACACGAGTCCACACG
Internal bar code:TGGAGTCATTGATCTTAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1297
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGTCTCTGCCTGAACCC
Suggested primer 2:GATTGACAGCCTGGGTTCCA