Insertion junction: CLIP2.013424_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013424
Chromosome:chromosome 13
Location:2748510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582201 (1 of 1) PTHR13622//PTHR13622:SF8 - THIAMIN PYROPHOSPHOKINASE // THIAMIN PYROPHOSPHOKINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGATTTAGCAGCTGCAGGCACCCGCGTACATGGAGGCTTCCCTCCAGC
Internal bar code:ACAAGCGGGTGGCCCCGGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAAAAACACACAGGCCCT
Suggested primer 2:TCTTGCAAAAGCGCCCTTTC