Insertion junction: CLIP2.013429_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013429
Chromosome:chromosome 9
Location:3610874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396809 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTGTGTTGCTCAGGATATACTGGCGTGAGGTGACCAATGCGGAGCTA
Internal bar code:GGAATTACAGTCAGCCCCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1482
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCAATACATGCGCTGCC
Suggested primer 2:TCGCGGTAAGTTTGAGGGTC