Insertion junction: CLIP2.013431_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013431
Chromosome:chromosome 10
Location:4788101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452950 TRP1 Transient receptor potential ion channel protein; (1 of 1) PTHR10117:SF46 - TRANSIENT-RECEPTOR-POTENTIAL-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAACATGGCTCGCTGGCCCGCCCCCTCCATCCTGACCCATACGTCGT
Internal bar code:TTACCGACCCGTAGTACCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACAGCGACCTGGTAGG
Suggested primer 2:AGCAACCCCAACAACTCACA