Insertion junction: CLIP2.013433_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013433
Chromosome:chromosome 1
Location:516804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003100 (1 of 1) IPR001623//IPR011011 - DnaJ domain // Zinc finger, FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCTGCAGCTTCTGCGCGCGGAGGCAGCACTGGAGGGTGAGGCCGTGG
Internal bar code:TGGTTCAACGAGATTCCACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTGGAATCCCTGCTCA
Suggested primer 2:AGACGTTCGCAAGGTAGGTG