Insertion junction: CLIP2.013440_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013440
Chromosome:chromosome 7
Location:6245636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g356550 (1 of 3) PTHR11017//PTHR11017:SF145//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCCCGGCGTGAATGATCAGCGGCTAGCGTGCGTAGATATGGCTGGCT
Internal bar code:CGCTGTCATGTAATGGTCAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGCGGCTTTGTAGAGA
Suggested primer 2:TCCTCAGTTGACACGCTCAC