Insertion junction: CLIP2.013447_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013447
Chromosome:chromosome 9
Location:3216094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394658 LCI28 (1 of 1) 1.1.1.21 - Aldehyde reductase / Polyol dehydrogenase (NADP(+)); Low-CO2-induced aldose reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTACCCAGCCGCTGCCACGACGACGTCTGACAGCCATCTCCATCACCC
Internal bar code:GTCCCTTTAGATGGCATGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:106
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGTTTGAAGCCGCACC
Suggested primer 2:TGCAAAAGAGCGGGTAGGAG