Insertion junction: CLIP2.013465_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013465
Chromosome:chromosome 16
Location:5734369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680700 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTCCGTGACTTTGTTATGCATGCCATCTGCGTTCATGCCGTTTGCCG
Internal bar code:CGCTGGGCTCATTTCGCGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3639
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTGCCGCCAATTCAACA
Suggested primer 2:CGCATGCAATTCCCTCGAAG