Insertion junction: CLIP2.013481_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013481
Chromosome:chromosome 3
Location:6990646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800375 (1 of 73) IPR000477//IPR005135 - Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGCCTGGTGCCTGGTTGCCTGGCGCCCGCCCTGCTGTGATGCCCTG
Internal bar code:TCGGGCTGAAACGTACTGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACTGGGTAGGTAGGCAG
Suggested primer 2:AGTTTGCATTTGTGGGCGTC