Insertion junction: CLIP2.013490_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013490
Chromosome:chromosome 9
Location:2125982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTAAGGCTGGATGCTGGTCTGCCTCCCGCTCACCTGTGGCCTTGTCGA
Internal bar code:GGTCGTTAGAGGGACCAGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTACTACTTGCGGTGGCC
Suggested primer 2:CTAGCCCAGTAACCCCCTCT