Insertion junction: CLIP2.013499_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013499
Chromosome:chromosome 4
Location:1366943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214504 (1 of 1) IPR000095//IPR001190//IPR008979//IPR017448 - CRIB domain // SRCR domain // Galactose-binding domain-like // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACCAACTCAGTTGTTCCATGGCTCTCACCTGACGGATCGCCATAGTA
Internal bar code:ATGCAGTTGGTGTTCTTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:858
LEAP-Seq percent confirming:80.6452
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTGGCACACGATGTTG
Suggested primer 2:CTCAAATCCAGGGCCCACAC