Insertion junction: CLIP2.013500_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013500
Chromosome:chromosome 8
Location:318410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358571 (1 of 5) IPR001054//IPR006189//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // CHASE domain // Nucleotide cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGGGGGTGCAAGGCGATGGGAACAGGCAACAGCGGGCAATGCATCA
Internal bar code:CGACATGGTAATAGTCTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:821
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCTTGGTGTGTTCGTG
Suggested primer 2:GTTTCGAGTCCTGGGCTTCA