Insertion junction: CLIP2.013505_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013505
Chromosome:chromosome 17
Location:158071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696950 (1 of 2) IPR000719//IPR001229//IPR001245//IPR002290//IPR011009//IPR016187//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // C-type lectin fold // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACGTGGGCTCGTATGTGGAGGACCTAGTGTTGGCCTGGGGCAGTCCT
Internal bar code:TCTACTACGTGGTCGTGGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1495
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCTTACCCCTGCTCAC
Suggested primer 2:TCAACACGAGTAGCCAGCAG