Insertion junction: CLIP2.013506_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013506
Chromosome:chromosome 3
Location:3051398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163850 (1 of 1) K10638 - E3 ubiquitin-protein ligase UHRF1 [EC:6.3.2.19] (UHRF1, NP95) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTATGTGTGTGTGTGACTGTGTGTGACTGTGTGGGTGGGTGCGGC
Internal bar code:CCGCGCTGTCCGGAAAGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:999
LEAP-Seq percent confirming:38.0952
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCACCCGTCTTCTTCTTC
Suggested primer 2:GGTATTGGTCTGGTGGGGTG