Insertion junction: CLIP2.013512_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013512
Chromosome:chromosome 8
Location:4033312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382650 UBQ4 (1 of 2) K09313 - homeobox protein cut-like (CUTL); Bi-ubiquitin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGAACTTCCTCACCAGACACCCTCTTAAAAAACTAAAGGTACGTGCA
Internal bar code:CGAGAGTCTGGATTCACTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:230
LEAP-Seq percent confirming:36.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGCTCCAGTCGCTTACT
Suggested primer 2:AAACAAAGTGCCAGACCCCA