Insertion junction: CLIP2.013514_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013514
Chromosome:chromosome 4
Location:3999363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g232202 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATGTCTGGGAGGACGGCCTTCTTGAAAAAGGCGGCGCCCCCGCCGGC
Internal bar code:GTTTGGGTCACGAGTCTATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTTCTCCCGGATGCTG
Suggested primer 2:AGGTATGCAGGTAGGGAGCA