Insertion junction: CLIP2.013516_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013516
Chromosome:chromosome 8
Location:1675049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g366101 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGTGTGTACTCGCTGTAAGTGCGCGCACTCGTGTATTCATTTGCCTC
Internal bar code:AGTGTATTTGGCAATCGTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:637
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTAGCCGTTCATGTTG
Suggested primer 2:TGCTTGGGCGTGACTTGTAT