Insertion junction: CLIP2.013520_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013520
Chromosome:chromosome 13
Location:4875338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605200 MMP29 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACCTACCACTGCACTGCCTTCAGTCGTGCCCGTTCTCACGTGCCC
Internal bar code:GGATAGCTTACATCCTCTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTTACCGTACGTCCGC
Suggested primer 2:AGTGAGTGCGGTGTCATCTG