Insertion junction: CLIP2.013527_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013527
Chromosome:chromosome 3
Location:5261610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800345 (1 of 1) PTHR23304//PTHR23304:SF106 - SPOT2-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTTCTGCCCCACACACTCGCACACTCCCTCCCCCTCCCGCCCCCGC
Internal bar code:GCAGCTCTTAATTGGTCATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2975
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GACCATCTTAGAGCCCGCTC
Suggested primer 2:CCACCAAGTCAGGGTCCATC