Insertion junction: CLIP2.013542_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013542
Chromosome:chromosome 17
Location:1164235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704300 FAP47 Flagellar Associated Protein 47; (1 of 1) PTHR23053//PTHR23053:SF2 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // PRIMARY CILIARY DYSKINESIA PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACGAGGCCGTGGAGAAGCTGCTCATTTTGGACAACCCCCACAAGTT
Internal bar code:ATGCTAGATATCCAATGTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2953
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCATGCGCGATGAAGAAC
Suggested primer 2:GGAACAGTTCGCTTTGGCTC