Insertion junction: CLIP2.013545_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013545
Chromosome:chromosome 12
Location:4956429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524600 (1 of 1) PTHR17630//PTHR17630:SF50 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACACACAAACACAAACACACACAAACACAGGCATGGCTGTGCTGG
Internal bar code:AGCATGTATGAGTCGTGCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGTTTTGCTTTCAGACA
Suggested primer 2:CGTGTCAGAGCTTGTCCCTT