Insertion junction: CLIP2.013558_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013558
Chromosome:chromosome 12
Location:4507412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520850 (1 of 1) K15153 - mediator of RNA polymerase II transcription subunit 31 (MED31, SOH1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCAATTCAAGGGCGAACCGCTCAAAGCCGCTGATTGCCAGTTCCTGG
Internal bar code:GTTATTGCCTGCCCCGGCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1299
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCCATCAACCCAGTGCT
Suggested primer 2:CATGTGCGCTCAATCCATGG