Insertion junction: CLIP2.013559_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013559
Chromosome:chromosome 13
Location:2150003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577650 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCGGAGCCTCGACATTAGCGGGACGTTGCCAGCCGCCACCGCGGCC
Internal bar code:GCCAGAAAGGTCGTGTATGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3201
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTACTACCGACCTGCGTG
Suggested primer 2:ACATAGCTGCACTGGGGAAC