Insertion junction: CLIP2.013567_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013567
Chromosome:chromosome 12
Location:8100351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552600 FKM9 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCCAACTATCCAACCTCCTTCCAACTTCCAACTTCCTTCCAACTATC
Internal bar code:GCAGGCAGGCAGTTGGTATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCATATGCACGTTGCCG
Suggested primer 2:GCTTAACAACTGTGCCTGGC