Insertion junction: CLIP2.013584_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013584
Chromosome:chromosome 13
Location:1370370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571700 CDPK9 (1 of 1) PF00069//PF07714//PF13499 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACCACGGGCGGGGCGTTTTGATTCCGGTTGCAGAGCGCTGACCACGG
Internal bar code:CCTTACTCCTCAATAGGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCTCAACTTTCCACGCT
Suggested primer 2:GTCTCCACGAAGCCAGTTCA