Insertion junction: CLIP2.013586_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013586
Chromosome:chromosome 6
Location:2426950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268800 FLA17,IFT139,FAP60 Intraflagellar transport protein 139; (1 of 1) PTHR14699//PTHR14699:SF0 - STI2 PROTEIN-RELATED // TETRATRICOPEPTIDE REPEAT PROTEIN 21 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGAAGAAGTGACGGCGTAGTGGGGAGGGAAGTTCCAGGCATGATTAC
Internal bar code:GGGGGAAAACTTTACTCATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGATAAGGGAGGGGCG
Suggested primer 2:CTCCTCCTTCTCCTCCTGCT