Insertion junction: CLIP2.013588_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013588
Chromosome:chromosome 8
Location:432320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTTTGGTGACGTCTACCGTTGGGCGCTGCGAGGAGCGGCGGCGGCGG
Internal bar code:ACGGCCCTTCATGCTGACTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAAGGGAAGCACTGGCA
Suggested primer 2:GCACACACACACACACGTAC