Insertion junction: CLIP2.013609_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013609
Chromosome:chromosome 10
Location:5262174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456400 DAT1 (1 of 1) PTHR11958//PTHR11958:SF63 - SODIUM/DICARBOXYLATE SYMPORTER-RELATED // EXCITATORY AMINO ACID TRANSPORTER 2, ISOFORM C; Dicarboxylate/amino acid cation sodium transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGACTGTCACCGCCTCGTACAGCGCCGTTCCGTTCATGTTGACGGTCG
Internal bar code:CGAAGTCCGGGAATTAGAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2445
LEAP-Seq percent confirming:84.4444
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTCACAGGGCGTGTAAC
Suggested primer 2:TCAATGATCACCTGCAGCGT