Insertion junction: CLIP2.013622_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013622
Chromosome:chromosome 7
Location:329984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314400 (1 of 1) PF00580//PF13538 - UvrD/REP helicase N-terminal domain (UvrD-helicase) // UvrD-like helicase C-terminal domain (UvrD_C_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGATGGCTTTGAATTTCCCATACCGCGCATGCTCAGGCACACATACA
Internal bar code:TGATATTTCTGTCTAAACCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1643
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGCGTGTCATCAACGA
Suggested primer 2:CAACACCTAGCCTCCAGTGG