Insertion junction: CLIP2.013624_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013624
Chromosome:chromosome 1
Location:2812576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017350 RMT3 Putative protein N-methyltransferase; (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCGGTGGCGGCGTTGGGAAGTGCGGTCCGGCGAAGGTGCGGGAGCG
Internal bar code:GCCGGGTGTGCTTTTTAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACACCCGAACACATTGC
Suggested primer 2:ATGGGTGACGAGTTTCGACC