Insertion junction: CLIP2.013625_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013625
Chromosome:chromosome 16
Location:4444567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668100 SMM48 (1 of 1) PTHR22809//PTHR22809:SF1 - METHYLTRANSFERASE-RELATED // METHYLTRANSFERASE-LIKE PROTEIN 6; S-adenosyl-L-methionine-dependent methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCTCCCAGTCGAAGTCGTGTTCATGGTACTCCGCCGCGGGGCGCGC
Internal bar code:ACTATAGAAAAATTTGTGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1813
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATGAGCAACCGCCGTTA
Suggested primer 2:CTCCTGCGTTTGTGTGTGTG