Insertion junction: CLIP2.013629_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013629
Chromosome:chromosome 3
Location:4176945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173300 (1 of 6) IPR007577//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Nucleotide-diphospho-sugar transferases 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATGGACCTCTCGGTATACCTATCTGTGCCTTAGTACCGGTCTCAGAA
Internal bar code:CAAAGTTTGAGTAGAGTCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1046
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCATGGCAAGCAGGAT
Suggested primer 2:GTACAGGAGTCGTCGCGTAG