Insertion junction: CLIP2.013631_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013631
Chromosome:chromosome 14
Location:2129797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621751 USP,USP2,UAP2 (1 of 1) 2.7.7.64 - UTP-monosaccharide-1-phosphate uridylyltransferase / USP; Wide substrate-specificity UDP-sugar pyrophosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTCCAGATGACAAAGTTTTCCGAGCGCGTAACGAGCCTCCTCGGGTC
Internal bar code:GAATTCGTGCCGACTTCTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCCCCCTAGCTTATCA
Suggested primer 2:AATGGGCCAACGAACAGACA