Insertion junction: CLIP2.013632_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013632
Chromosome:chromosome 6
Location:7979852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304550 PAN2,PAR1 (1 of 1) K12571 - PAB-dependent poly(A)-specific ribonuclease subunit 2 (PAN2); Poly(A)-ribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGTTGAGGCTACCCCGTTCTGTCTTTTAATGCCTTCTAACTTTGTGC
Internal bar code:TCTGGCATTGTAAGGAAGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:869
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCCTGCTGTCCTTTCG
Suggested primer 2:TCTTACACACGCTCCACCAC