Insertion junction: CLIP2.013632_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013632
Chromosome:chromosome 6
Location:7979854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304550 PAN2,PAR1 (1 of 1) K12571 - PAB-dependent poly(A)-specific ribonuclease subunit 2 (PAN2); Poly(A)-ribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGGGCTAGCCAACCTAGCCTCGTACCGTCATAACCTGTCATCACAC
Internal bar code:TCTGGCATTGTAAGGAAGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:65.7143
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTACACACGCTCCACCAC
Suggested primer 2:ACACTCCTGCTGTCCTTTCG