Insertion junction: CLIP2.013650_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013650
Chromosome:chromosome 6
Location:7051023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297516 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS
Cre06.g297550 (1 of 1) K14649 - transcription initiation factor TFIID subunit 8 (TAF8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCAAGGCGCTTGAAATGGCAGGTGCCTTCATCTCCTTCTCGCGCGGC
Internal bar code:TTTCCAATTAGGCTGGATGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1644
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACACCCCTGTTCTCACC
Suggested primer 2:AGTAGTAGCGCTGCAGAACC