Insertion junction: CLIP2.013655_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013655
Chromosome:chromosome 12
Location:4185449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517800 (1 of 18) PF12906 - RING-variant domain (RINGv) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGGGTAGGCGGGCGAGCCCAGGTGAAGCGGCGCGCGTTTACAAAGG
Internal bar code:CTGTATGGCGCCGAGTCTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:478
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCCCTACAGCCACTTT
Suggested primer 2:GTGTGTGTTTGTGTGCGTGT