Insertion junction: CLIP2.013657_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013657
Chromosome:chromosome 10
Location:868462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423600 (1 of 1) PTHR10891//PTHR10891:SF5//PTHR22847 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED // WD40 REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACAAACAGGGCCAGCACGCTGTCTGTGCACGGGTCCGACGGTTTC
Internal bar code:AAGGCAAGCACGTGTCACCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTAACATGTTCCTTCG
Suggested primer 2:ACCACAACCACAACCACCAT