Insertion junction: CLIP2.013661_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013661
Chromosome:chromosome 9
Location:6575801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTCCTGCAACTTTGCCGTGGCTGACTGGCCCTGCTCCCCGGCTCGCC
Internal bar code:GTACATCGTCAAAATAATAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAGGGTTTACAGCGACC
Suggested primer 2:CTTGTTTTCAGCGGTTGGGG