Insertion junction: CLIP2.013683_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013683
Chromosome:chromosome 2
Location:5738624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116650 (1 of 7) 3.5.1.52 - Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase / N-oligosaccharide glycopeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAGGGCACATGCCACAGACAACACACAATGCCGTCGAGTACTAGAA
Internal bar code:GCGGTCGTGCCCTTCGAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2050
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCATAAACAGCGCATCCTGC
Suggested primer 2:CCAGCTTCGCCTGTGTTCTA