Insertion junction: CLIP2.013689_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013689
Chromosome:chromosome 2
Location:5305644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113050 (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGGCTGAGCTCGCGCAGCTGGACGCAGGCTCATGGCTGTCACCTGA
Internal bar code:TGCCATGAAGGCTCTCAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:989
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCATGTCCAAACCCGCA
Suggested primer 2:ACTTGCGTCAGCTCCTCTTC